BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C03LP1|AL428512
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1756 755 0.0
3x_Contig305 660 0.0
>3x_Contig1756
Length = 16846
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 514 ggtattcaaattcatggtgttaattctatctcggaattgagacaaccatctgatgcagga 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtattcaaattcatggtgttaattctatctcggaattgagacaaccatctgatgcagga 60
Query: 574 attgagacttacgacgaccatcgagtagctatgtcattctcactgttggctggtatggtt 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgagacttacgacgaccatcgagtagctatgtcattctcactgttggctggtatggtt 120
Query: 634 aattctgataagaaggatgatgaatcatctgttagaattttggagagacaatgtaccggt 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattctgataagaaggatgatgaatcatctgttagaattttggagagacaatgtaccggt 180
Query: 694 aaaacatggcctggttggtgggatgtcctacattctcaattgggtgcaagacttgacggc 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaacatggcctggttggtgggatgtcctacattctcaattgggtgcaagacttgacggc 240
Query: 754 gctgaaccttcaacaacaaaatcatctgaagttaaaaaaagtgtagtcattataggaatg 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctgaaccttcaacaacaaaatcatctgaagttaaaaaaagtgtagtcattataggaatg 300
Query: 814 agagcggctggtaaaagtactgtcagcaagtggtgtgctgagtccttgggttacaggctt 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagcggctggtaaaagtactgtcagcaagtggtgtgctgagtccttgggttacaggctt 360
Query: 874 cttgatttagatgaggaattt 894
|||||||||||||||||||||
Sbjct: 361 cttgatttagatgaggaattt 381
>3x_Contig305
Length = 1227
Score = 660 bits (333), Expect = 0.0
Identities = 354/357 (99%), Gaps = 3/357 (0%)
Strand = Plus / Plus
Query: 1 gactatcaagatgatggatgctttcggtattaaagtcactacgtctactacagagccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gactatcaagatgatggatgctttcggtattaaagtcactacgtctactacagagccttt 932
Query: 61 cacctatcacattccgaagg-aaattacatcaatccagcagagtataccatcgagtcaga 119
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 933 cacctatcacattccgaagggaaattacatcaatccagcagagtataccatcgagtcaga 992
Query: 120 tgcttcttctgctacctacccattatcatttgctgctatcactggaaccacggtgactgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 tgcttcttctgctacctacccattatcatttgctgctatcactggaaccacggtgactgt 1052
Query: 180 tccaaatattggatcggcctctttgcaaggtgatgccaggtttgcagttgatgttttgag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tccaaatattggatcggcctctttgcaaggtgatgccaggtttgcagttgatgttttgag 1112
Query: 240 accaatgggatgtgaggttactcagactgcaacctcaactaccgtgactggtccaccaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 accaatgggatgtgaggttactcagactgcaacctcaactaccgtgactggtccaccaag 1172
Query: 300 aggtcagttaaaacctttaaagcacgtggatatggagccgatgactgatgcattttt 356
||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1173 aggtcagttaaaa-ctttaaagcacgtggatatggag-cgatgactgatgcattttt 1227
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6074
Number of Sequences: 1807
Number of extensions: 6074
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 2
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)